Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TRBV5-4A0A0C4DH59 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-4A0A0C4DH59 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRBV5-4A0A0C4DH59 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-4A0A0C4DH59 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC099343.3-201ENST00000605834 2503 ntBASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 TMPOP1-202ENST00000424642 1267 ntBASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV5-4A0A0C4DH59 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 HOMER2P1-201ENST00000455653 964 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC063952.2-201ENST00000498792 1227 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC079602.3-201ENST00000623931 403 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AL354751.1-201ENST00000412768 1863 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC135776.1-201ENST00000319817 2481 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 NEFHP1-201ENST00000412845 2629 ntBASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV5-4A0A0C4DH59 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 LINC01126-201ENST00000623515 1646 ntBASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 FAM8A6P-201ENST00000407496 1135 ntBASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 KRT18P38-201ENST00000449496 1282 ntBASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-4A0A0C4DH59 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 DUX4L26-201ENST00000489078 1255 ntBASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-4A0A0C4DH59 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms