Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 VENTXP5-201ENST00000523979 775 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC104390.1-201ENST00000555663 520 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MIR3917-201ENST00000580971 93 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC010240.3-201ENST00000607688 395 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC018445.3-201ENST00000624177 1945 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZNF444P1-201ENST00000559497 298 ntBASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC091076.1-201ENST00000610741 619 ntBASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC083849.1-201ENST00000615227 514 ntBASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
IGHV4-28A0A0C4DH34 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC092597.1-201ENST00000487352 616 ntBASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 HYMAI.1-201ENST00000620949 238 ntBASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms