Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 MIR4674-201ENST00000582457 87 ntBASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 DGCR10-201ENST00000609839 495 ntBASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC036111.1-201ENST00000533973 1582 ntBASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC116562.2-201ENST00000507042 360 ntBASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 AL163051.1-201ENST00000569214 1512 ntBASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-3A0A0A0MS03 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 AL645608.8-201ENST00000606034 2086 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC093010.1-201ENST00000473625 1624 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 FAM197Y1-201ENST00000421178 764 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 MFAP1P1-201ENST00000442257 1255 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CA15P1-201ENST00000481698 905 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 MIR4651-201ENST00000582622 73 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 MIR3180-5-201ENST00000583743 153 ntBASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRBV5-3A0A0A0MS03 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV5-3A0A0A0MS03 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms