Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 FSCN1P1-201ENST00000568912 1481 ntBASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 TNRC18P3-201ENST00000441896 2691 ntBASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV30A0A087WSZ9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 MIR6786-201ENST00000616843 113 ntBASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV30A0A087WSZ9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms