Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX11Q9Y5W9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 KRT18P31-201ENST00000506277 1292 ntBASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 LINC01711-201ENST00000598340 967 ntBASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 AC104692.2-201ENST00000603054 253 ntBASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX11Q9Y5W9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 MIR564-202ENST00000385049 94 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 AC079781.3-201ENST00000449110 356 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 AC104819.1-201ENST00000504587 486 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 AC090616.6-201ENST00000582640 721 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 IGHV3-41-201ENST00000613121 348 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 AP000974.1-201ENST00000623909 2387 ntBASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX11Q9Y5W9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 AL160237.2-201ENST00000556165 472 ntBASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 AL390719.2-201ENST00000606993 987 ntBASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX11Q9Y5W9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms