Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
R3HCC1Q9Y3T6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
R3HCC1Q9Y3T6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 AC126763.1-201ENST00000552015 2118 ntBASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 AL135905.2-201ENST00000584934 1404 ntBASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
R3HCC1Q9Y3T6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 SIRPAP1-201ENST00000448467 1770 ntBASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 MIR718-201ENST00000390190 70 ntBASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
R3HCC1Q9Y3T6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms