Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 AC111152.3-201ENST00000569699 673 ntBASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 NUS1P1-201ENST00000446295 882 ntBASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 MIR3180-1-201ENST00000580374 94 ntBASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 MIR3180-4-201ENST00000582223 153 ntBASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 MIR3180-3-201ENST00000584616 94 ntBASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SSX2IPQ9Y2D8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 TSPY22P-201ENST00000427496 604 ntBASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 AP002414.4-201ENST00000589764 1148 ntBASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 AC010240.3-201ENST00000607688 395 ntBASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX2IPQ9Y2D8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms