Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 SDHAP2-201ENST00000455183 2001 ntBASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 AC034232.1-201ENST00000506026 1064 ntBASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 AC009113.1-201ENST00000570267 2443 ntBASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGXB4Q9UGU5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGXB4Q9UGU5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.64■□□□□ 0.74
HMGXB4Q9UGU5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HMGXB4Q9UGU5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGXB4Q9UGU5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
HMGXB4Q9UGU5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 SPDYE13P-201ENST00000445314 798 ntBASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 AC083849.1-201ENST00000615227 514 ntBASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGXB4Q9UGU5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 AL590326.2-201ENST00000625139 305 ntBASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGXB4Q9UGU5 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 AL671277.2-201ENST00000458060 996 ntBASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 VENTXP5-201ENST00000523979 775 ntBASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 MIR3180-4-201ENST00000582223 153 ntBASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGXB4Q9UGU5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms