Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3BQ9UBC3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3BQ9UBC3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 KRT16P4-201ENST00000453883 522 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AC091607.1-201ENST00000490318 1060 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AC009065.1-201ENST00000564055 1225 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AP005901.3-202ENST00000581653 237 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AL353801.3-201ENST00000609898 542 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 AC116562.4-201ENST00000641316 2276 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3BQ9UBC3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 AP002469.2-201ENST00000531724 424 ntBASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3BQ9UBC3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DNMT3BQ9UBC3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
DNMT3BQ9UBC3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DNMT3BQ9UBC3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
DNMT3BQ9UBC3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
DNMT3BQ9UBC3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DNMT3BQ9UBC3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms