Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 MIR1238-201ENST00000408483 83 ntBASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 BX088651.1-201ENST00000540551 451 ntBASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
LINC00474Q9P2X8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 AP000974.1-201ENST00000623909 2387 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 EGLN1P1-201ENST00000531623 762 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 AP000525.1-201ENST00000608286 694 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 AC010653.2-201ENST00000623505 997 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 MYC-208ENST00000641036 567 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 TNRC18P3-201ENST00000441896 2691 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 AC099398.1-201ENST00000567919 2776 ntBASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00474Q9P2X8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00474Q9P2X8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms