Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 MIR3180-4-201ENST00000582223 153 ntBASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 AC126763.1-201ENST00000552015 2118 ntBASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 AL391807.1-203ENST00000604392 2365 ntBASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 VENTXP5-201ENST00000523979 775 ntBASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPHK1Q9NYA1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 FAM86EP-206ENST00000510506 987 ntBASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 ZNF444P1-201ENST00000559497 298 ntBASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 AL136038.4-201ENST00000603606 1261 ntBASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 AL121956.5-201ENST00000625261 221 ntBASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPHK1Q9NYA1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 HLA-F-220ENST00000434407 884 ntBASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPHK1Q9NYA1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms