Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL139384.1-201ENST00000612143 3047 ntBASIC17.94■□□□□ 0.46
NDE1Q9NXR1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.94■□□□□ 0.46
NDE1Q9NXR1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NDE1Q9NXR1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 RCC2P6-201ENST00000526625 1557 ntBASIC17.93■□□□□ 0.46
NDE1Q9NXR1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 TSPY23P-201ENST00000440136 739 ntBASIC17.93■□□□□ 0.46
NDE1Q9NXR1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.93■□□□□ 0.46
NDE1Q9NXR1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NDE1Q9NXR1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.92■□□□□ 0.46
NDE1Q9NXR1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDE1Q9NXR1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.91■□□□□ 0.46
NDE1Q9NXR1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 AC068587.9-201ENST00000641814 219 ntBASIC17.91■□□□□ 0.46
NDE1Q9NXR1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 AC108860.2-201ENST00000562760 2183 ntBASIC17.91■□□□□ 0.46
NDE1Q9NXR1 AL499627.1-201ENST00000569373 2188 ntBASIC17.91■□□□□ 0.46
NDE1Q9NXR1 FLJ13224-201ENST00000313737 1514 ntBASIC17.91■□□□□ 0.46
NDE1Q9NXR1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.91■□□□□ 0.46
NDE1Q9NXR1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NDE1Q9NXR1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms