Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC52A1Q9NWF4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 IGHV3-22-201ENST00000520721 359 ntBASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 AC009154.2-201ENST00000621177 724 ntBASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC26.42■■□□□ 1.82
SLC52A1Q9NWF4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 PGAM5P1-201ENST00000518923 814 ntBASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC52A1Q9NWF4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 AP005117.1-201ENST00000584346 1413 ntBASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC52A1Q9NWF4 AC125634.1-201ENST00000438758 1403 ntBASIC26.39■■□□□ 1.82
SLC52A1Q9NWF4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SLC52A1Q9NWF4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.39■■□□□ 1.82
SLC52A1Q9NWF4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC52A1Q9NWF4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC26.39■■□□□ 1.82
SLC52A1Q9NWF4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms