Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 FAM207BP-201ENST00000447172 505 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 B3GAT3P1-201ENST00000471720 806 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 AL031985.4-201ENST00000642138 673 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 SDHAP2-201ENST00000455183 2001 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 PRORSD1P-202ENST00000563365 2154 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 GPAT2P1-201ENST00000444924 1672 ntBASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 ESRRAP1-201ENST00000400596 1257 ntBASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 CR392000.1-201ENST00000624770 1228 ntBASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC52A3Q9NQ40 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC52A3Q9NQ40 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC52A3Q9NQ40 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 AP000692.2-201ENST00000608391 879 ntBASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 MIR6786-201ENST00000616843 113 ntBASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 AC073648.6-201ENST00000641589 218 ntBASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 AC034236.2-201ENST00000606662 1610 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms