Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 GCSHP5-201ENST00000443090 522 ntBASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 AC116562.2-201ENST00000507042 360 ntBASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 AC113410.3-201ENST00000623366 203 ntBASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 GPAT2P1-201ENST00000444924 1672 ntBASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 AC099343.3-201ENST00000605834 2503 ntBASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NLRC4Q9NPP4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 MYLKP1-201ENST00000509077 1580 ntBASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 AL023284.2-201ENST00000405850 579 ntBASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 UBE2SP1-201ENST00000450587 669 ntBASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
NLRC4Q9NPP4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NLRC4Q9NPP4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 PCDHB18P-201ENST00000524813 2368 ntBASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 AC097488.1-201ENST00000507834 756 ntBASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 ESPNP-201ENST00000270691 2015 ntBASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLRC4Q9NPP4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 AC067852.2-201ENST00000590513 2313 ntBASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 DGCR10-201ENST00000609839 495 ntBASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 REXO1L10P-201ENST00000615707 1290 ntBASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 REXO1L12P-201ENST00000622156 912 ntBASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLRC4Q9NPP4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms