Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 FAM207BP-201ENST00000447172 505 ntBASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN28AQ9H9Z2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 AC124067.4-201ENST00000519691 2379 ntBASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 FITM1-202ENST00000559294 800 ntBASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN28AQ9H9Z2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 AP000692.2-201ENST00000608391 879 ntBASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.79■□□□□ 0.44
LIN28AQ9H9Z2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
LIN28AQ9H9Z2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms