Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 AC099343.3-201ENST00000605834 2503 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 AC092597.1-201ENST00000487352 616 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 VENTXP5-201ENST00000523979 775 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 MIR3917-201ENST00000580971 93 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 AC010240.3-201ENST00000607688 395 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 AC083849.1-201ENST00000615227 514 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 KRT8P7-201ENST00000533003 1432 ntBASIC16.43■□□□□ 0.22
C12orf49Q9H741 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C12orf49Q9H741 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.43■□□□□ 0.22
C12orf49Q9H741 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 AC104390.1-201ENST00000555663 520 ntBASIC16.42■□□□□ 0.22
C12orf49Q9H741 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 AL121956.5-201ENST00000625261 221 ntBASIC16.42■□□□□ 0.22
C12orf49Q9H741 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.42■□□□□ 0.22
C12orf49Q9H741 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
C12orf49Q9H741 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C12orf49Q9H741 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 PCED1CP-201ENST00000419887 785 ntBASIC16.41■□□□□ 0.22
C12orf49Q9H741 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 ZNF444P1-201ENST00000559497 298 ntBASIC16.41■□□□□ 0.22
C12orf49Q9H741 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C12orf49Q9H741 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf49Q9H741 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
C12orf49Q9H741 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms