Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AC141257.4-201ENST00000634557 245 ntBASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AC136944.6-201ENST00000634818 245 ntBASIC17.16■□□□□ 0.34
UBQLN3Q9H347 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 AL354751.1-201ENST00000412768 1863 ntBASIC17.16■□□□□ 0.34
UBQLN3Q9H347 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBQLN3Q9H347 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 KRT8P45-201ENST00000414328 1447 ntBASIC17.15■□□□□ 0.34
UBQLN3Q9H347 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 DUX4L26-201ENST00000489078 1255 ntBASIC17.15■□□□□ 0.34
UBQLN3Q9H347 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBQLN3Q9H347 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.14■□□□□ 0.34
UBQLN3Q9H347 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
UBQLN3Q9H347 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 AC018470.1-201ENST00000624790 3129 ntBASIC17.14■□□□□ 0.33
UBQLN3Q9H347 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 AC117947.1-201ENST00000427448 529 ntBASIC17.14■□□□□ 0.33
UBQLN3Q9H347 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 AL049597.2-201ENST00000565575 961 ntBASIC17.14■□□□□ 0.33
UBQLN3Q9H347 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBQLN3Q9H347 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms