Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.01■□□□□ 0.79
CDT1Q9H211 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.01■□□□□ 0.79
CDT1Q9H211 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.01■□□□□ 0.79
CDT1Q9H211 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.01■□□□□ 0.79
CDT1Q9H211 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.01■□□□□ 0.79
CDT1Q9H211 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.01■□□□□ 0.79
CDT1Q9H211 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.01■□□□□ 0.79
CDT1Q9H211 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20■□□□□ 0.79
CDT1Q9H211 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20■□□□□ 0.79
CDT1Q9H211 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20■□□□□ 0.79
CDT1Q9H211 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDT1Q9H211 AC024563.2-201ENST00000603282 481 ntBASIC20■□□□□ 0.79
CDT1Q9H211 AC069148.1-201ENST00000608741 768 ntBASIC20■□□□□ 0.79
CDT1Q9H211 AC093458.2-201ENST00000623150 629 ntBASIC20■□□□□ 0.79
CDT1Q9H211 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20■□□□□ 0.79
CDT1Q9H211 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20■□□□□ 0.79
CDT1Q9H211 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDT1Q9H211 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20■□□□□ 0.79
CDT1Q9H211 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20■□□□□ 0.79
CDT1Q9H211 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CDT1Q9H211 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDT1Q9H211 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.99■□□□□ 0.79
CDT1Q9H211 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDT1Q9H211 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDT1Q9H211 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.99■□□□□ 0.79
CDT1Q9H211 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDT1Q9H211 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDT1Q9H211 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDT1Q9H211 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDT1Q9H211 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDT1Q9H211 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.98■□□□□ 0.79
CDT1Q9H211 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 KRT18P48-201ENST00000434763 852 ntBASIC19.98■□□□□ 0.79
CDT1Q9H211 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 AP003733.1-201ENST00000491725 852 ntBASIC19.98■□□□□ 0.79
CDT1Q9H211 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 AC126763.1-201ENST00000552015 2118 ntBASIC19.98■□□□□ 0.79
CDT1Q9H211 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.98■□□□□ 0.79
CDT1Q9H211 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDT1Q9H211 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 TNXA-203ENST00000507684 2038 ntBASIC19.98■□□□□ 0.79
CDT1Q9H211 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDT1Q9H211 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.98■□□□□ 0.79
CDT1Q9H211 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDT1Q9H211 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.97■□□□□ 0.79
CDT1Q9H211 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms