Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 REXO1L9P-201ENST00000604264 2108 ntBASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 RPS2P4-201ENST00000476944 856 ntBASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 RN7SL471P-201ENST00000580476 299 ntBASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 AC130371.2-201ENST00000619443 611 ntBASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 FAM207BP-201ENST00000447172 505 ntBASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
PHACTR1Q9C0D0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHACTR1Q9C0D0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHACTR1Q9C0D0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms