Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 ATP5G2P1-201ENST00000433580 426 ntBASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 GRAMD4P1-201ENST00000435181 1110 ntBASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC104390.1-201ENST00000555663 520 ntBASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 TK1-205ENST00000590862 642 ntTSL 3 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC092329.2-201ENST00000598402 547 ntBASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC126763.1-201ENST00000552015 2118 ntBASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC6.28□□□□□ -1.4
KRTAP4-3Q9BYR4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC6.27□□□□□ -1.4
KRTAP4-3Q9BYR4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
KRTAP4-3Q9BYR4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.4
KRTAP4-3Q9BYR4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
KRTAP4-3Q9BYR4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 LINC00167-201ENST00000530583 1419 ntBASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 AC104581.1-202ENST00000635932 2618 ntBASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
KRTAP4-3Q9BYR4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms