Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 AL691432.2-201ENST00000607222 2038 ntBASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 AC128676.1-201ENST00000454392 318 ntBASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PNMA6B-201ENST00000538162 1200 ntBASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFAF3Q9BU61 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 KRT17P3-201ENST00000420566 1262 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC093827.2-201ENST00000512654 315 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC142381.4-202ENST00000563973 229 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 LINC00554-201ENST00000564841 3011 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AL645608.8-201ENST00000606034 2086 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 AC022211.2-201ENST00000585075 2527 ntBASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NDUFAF3Q9BU61 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 GNAS-203ENST00000306120 1878 ntBASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFAF3Q9BU61 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms