Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.01■□□□□ 0.95
ARID3AQ99856 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID3AQ99856 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID3AQ99856 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID3AQ99856 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 F2R-202ENST00000505600 442 ntTSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21■□□□□ 0.95
ARID3AQ99856 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21■□□□□ 0.95
ARID3AQ99856 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21■□□□□ 0.95
ARID3AQ99856 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ARID3AQ99856 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21■□□□□ 0.95
ARID3AQ99856 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21■□□□□ 0.95
ARID3AQ99856 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID3AQ99856 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 WIZP1-201ENST00000531444 2299 ntBASIC20.99■□□□□ 0.95
ARID3AQ99856 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.99■□□□□ 0.95
ARID3AQ99856 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.99■□□□□ 0.95
ARID3AQ99856 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ARID3AQ99856 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 YBX1P10-201ENST00000444752 975 ntBASIC20.99■□□□□ 0.95
ARID3AQ99856 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 RN7SL471P-201ENST00000580476 299 ntBASIC20.99■□□□□ 0.95
ARID3AQ99856 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.99■□□□□ 0.95
ARID3AQ99856 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID3AQ99856 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.99■□□□□ 0.95
ARID3AQ99856 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARID3AQ99856 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.98■□□□□ 0.95
ARID3AQ99856 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.98■□□□□ 0.95
ARID3AQ99856 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.98■□□□□ 0.95
ARID3AQ99856 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.98■□□□□ 0.95
ARID3AQ99856 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 ITM2C-210ENST00000620962 501 ntBASIC20.98■□□□□ 0.95
ARID3AQ99856 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.98■□□□□ 0.95
ARID3AQ99856 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.98■□□□□ 0.95
ARID3AQ99856 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.98■□□□□ 0.95
ARID3AQ99856 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARID3AQ99856 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.97■□□□□ 0.95
ARID3AQ99856 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARID3AQ99856 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms