Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF2Q99805 AL354751.1-201ENST00000412768 1863 ntBASIC17.18■□□□□ 0.34
TM9SF2Q99805 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF2Q99805 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.18■□□□□ 0.34
TM9SF2Q99805 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF2Q99805 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF2Q99805 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.18■□□□□ 0.34
TM9SF2Q99805 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TM9SF2Q99805 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 AC005521.1-201ENST00000393351 872 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 LIN28AP1-201ENST00000429574 405 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 SLC25A1P2-201ENST00000430693 912 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 AC116562.4-202ENST00000641738 218 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 Z98044.1-201ENST00000632503 1764 ntBASIC17.17■□□□□ 0.34
TM9SF2Q99805 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF2Q99805 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.17■□□□□ 0.34
TM9SF2Q99805 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 RN7SL850P-201ENST00000579959 291 ntBASIC17.16■□□□□ 0.34
TM9SF2Q99805 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF2Q99805 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF2Q99805 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF2Q99805 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF2Q99805 ATP5G1P1-201ENST00000448724 379 ntBASIC17.15■□□□□ 0.34
TM9SF2Q99805 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms