Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.33□□□□□ -0.44
LITAFQ99732 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
LITAFQ99732 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LITAFQ99732 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LITAFQ99732 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LITAFQ99732 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 KRT17P1-201ENST00000399211 1546 ntBASIC12.32□□□□□ -0.44
LITAFQ99732 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.32□□□□□ -0.44
LITAFQ99732 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.32□□□□□ -0.44
LITAFQ99732 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 BID-214ENST00000617586 542 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.32□□□□□ -0.44
LITAFQ99732 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LITAFQ99732 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LITAFQ99732 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 AC105020.1-201ENST00000435356 2205 ntBASIC12.31□□□□□ -0.44
LITAFQ99732 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 MYLKP1-201ENST00000509077 1580 ntBASIC12.31□□□□□ -0.44
LITAFQ99732 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 AC138932.1-201ENST00000534164 6830 ntBASIC12.31□□□□□ -0.44
LITAFQ99732 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
LITAFQ99732 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.31□□□□□ -0.44
LITAFQ99732 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LITAFQ99732 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LITAFQ99732 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LITAFQ99732 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms