Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AC145285.6-201ENST00000604632 637 ntBASIC21.9■■□□□ 1.1
NEK1Q96PY6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AC099343.3-201ENST00000605834 2503 ntBASIC21.9■■□□□ 1.1
NEK1Q96PY6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 AL162741.1-201ENST00000565563 1558 ntBASIC21.9■■□□□ 1.1
NEK1Q96PY6 AL163051.1-201ENST00000569214 1512 ntBASIC21.9■■□□□ 1.1
NEK1Q96PY6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEK1Q96PY6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NEK1Q96PY6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.89■■□□□ 1.1
NEK1Q96PY6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NEK1Q96PY6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NEK1Q96PY6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 AC112497.1-201ENST00000624824 639 ntBASIC21.89■■□□□ 1.09
NEK1Q96PY6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NEK1Q96PY6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 AC007613.1-201ENST00000572811 2597 ntBASIC21.89■■□□□ 1.09
NEK1Q96PY6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NEK1Q96PY6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEK1Q96PY6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 AC135776.1-201ENST00000319817 2481 ntBASIC21.88■■□□□ 1.09
NEK1Q96PY6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.88■■□□□ 1.09
NEK1Q96PY6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 AC009947.2-201ENST00000444014 672 ntBASIC21.87■■□□□ 1.09
NEK1Q96PY6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 AC104390.1-201ENST00000555663 520 ntBASIC21.87■■□□□ 1.09
NEK1Q96PY6 AL512604.3-201ENST00000569583 964 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms