Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
COL21A1Q96P44 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 BX088651.1-201ENST00000540551 451 ntBASIC17.51■□□□□ 0.39
COL21A1Q96P44 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.51■□□□□ 0.39
COL21A1Q96P44 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 HEIH-201ENST00000623091 1652 ntBASIC17.51■□□□□ 0.39
COL21A1Q96P44 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL21A1Q96P44 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 MMP23A-201ENST00000234610 1017 ntBASIC17.5■□□□□ 0.39
COL21A1Q96P44 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 AC126763.1-201ENST00000552015 2118 ntBASIC17.5■□□□□ 0.39
COL21A1Q96P44 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL21A1Q96P44 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL21A1Q96P44 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AC068880.1-201ENST00000507289 2297 ntBASIC17.49■□□□□ 0.39
COL21A1Q96P44 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
COL21A1Q96P44 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL21A1Q96P44 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms