Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
FGD4Q96M96 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
FGD4Q96M96 KRT16P4-201ENST00000453883 522 ntBASIC20.93■□□□□ 0.94
FGD4Q96M96 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.93■□□□□ 0.94
FGD4Q96M96 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.93■□□□□ 0.94
FGD4Q96M96 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.93■□□□□ 0.94
FGD4Q96M96 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 AC099336.1-202ENST00000602961 463 ntBASIC20.93■□□□□ 0.94
FGD4Q96M96 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
FGD4Q96M96 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 AL353692.3-201ENST00000407031 1396 ntBASIC20.93■□□□□ 0.94
FGD4Q96M96 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.93■□□□□ 0.94
FGD4Q96M96 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.93■□□□□ 0.94
FGD4Q96M96 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FGD4Q96M96 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.93■□□□□ 0.94
FGD4Q96M96 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FGD4Q96M96 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
FGD4Q96M96 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
FGD4Q96M96 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.92■□□□□ 0.94
FGD4Q96M96 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FGD4Q96M96 AP002469.2-201ENST00000531724 424 ntBASIC20.92■□□□□ 0.94
FGD4Q96M96 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.92■□□□□ 0.94
FGD4Q96M96 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.92■□□□□ 0.94
FGD4Q96M96 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.92■□□□□ 0.94
FGD4Q96M96 AC124864.1-201ENST00000623408 392 ntBASIC20.92■□□□□ 0.94
FGD4Q96M96 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.92■□□□□ 0.94
FGD4Q96M96 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.92■□□□□ 0.94
FGD4Q96M96 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.92■□□□□ 0.94
FGD4Q96M96 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.92■□□□□ 0.94
FGD4Q96M96 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FGD4Q96M96 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.91■□□□□ 0.94
FGD4Q96M96 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.91■□□□□ 0.94
FGD4Q96M96 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 SLC25A6P4-201ENST00000586535 553 ntBASIC20.91■□□□□ 0.94
FGD4Q96M96 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.91■□□□□ 0.94
FGD4Q96M96 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FGD4Q96M96 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
FGD4Q96M96 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.9■□□□□ 0.94
FGD4Q96M96 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 NSUN5P1-202ENST00000421140 1535 ntBASIC20.9■□□□□ 0.94
FGD4Q96M96 NSUN5P2-203ENST00000457352 1529 ntBASIC20.9■□□□□ 0.94
FGD4Q96M96 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
FGD4Q96M96 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.9■□□□□ 0.94
FGD4Q96M96 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FGD4Q96M96 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms