Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 AC005521.1-201ENST00000393351 872 ntBASIC19.91■□□□□ 0.78
SEMA4DQ92854 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 AL512604.3-201ENST00000569583 964 ntBASIC19.91■□□□□ 0.78
SEMA4DQ92854 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 SDHAP2-201ENST00000455183 2001 ntBASIC19.9■□□□□ 0.78
SEMA4DQ92854 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 AC135050.7-201ENST00000624508 2218 ntBASIC19.9■□□□□ 0.78
SEMA4DQ92854 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 NEK4P2-201ENST00000580004 1012 ntBASIC19.9■□□□□ 0.78
SEMA4DQ92854 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA4DQ92854 ESPNP-201ENST00000270691 2015 ntBASIC19.9■□□□□ 0.78
SEMA4DQ92854 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA4DQ92854 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SEMA4DQ92854 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
SEMA4DQ92854 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.89■□□□□ 0.78
SEMA4DQ92854 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 LINC01023-201ENST00000606054 436 ntBASIC19.89■□□□□ 0.77
SEMA4DQ92854 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 AL023973.1-201ENST00000624619 620 ntBASIC19.89■□□□□ 0.77
SEMA4DQ92854 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA4DQ92854 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.89■□□□□ 0.77
SEMA4DQ92854 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA4DQ92854 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA4DQ92854 AL137013.1-201ENST00000432946 1228 ntBASIC19.88■□□□□ 0.77
SEMA4DQ92854 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms