Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 LINC01311-201ENST00000565162 1445 ntBASIC21.77■■□□□ 1.08
STAG1Q8WVM7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STAG1Q8WVM7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
STAG1Q8WVM7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STAG1Q8WVM7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 UPK3BP1-201ENST00000428678 509 ntBASIC21.75■■□□□ 1.07
STAG1Q8WVM7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 AL136038.3-201ENST00000561909 1096 ntBASIC21.75■■□□□ 1.07
STAG1Q8WVM7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 AC099343.3-201ENST00000605834 2503 ntBASIC21.75■■□□□ 1.07
STAG1Q8WVM7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
STAG1Q8WVM7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 VENTXP5-201ENST00000523979 775 ntBASIC21.74■■□□□ 1.07
STAG1Q8WVM7 ZNF444P1-201ENST00000559497 298 ntBASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 AC005332.1-201ENST00000577698 1310 ntBASIC21.74■■□□□ 1.07
STAG1Q8WVM7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
STAG1Q8WVM7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms