Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 AL162741.1-201ENST00000565563 1558 ntBASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHROOM3Q8TF72 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC022616.7-201ENST00000525383 220 ntBASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC104390.1-201ENST00000555663 520 ntBASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHROOM3Q8TF72 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
SHROOM3Q8TF72 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AL512604.3-201ENST00000569583 964 ntBASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 MIR564-202ENST00000385049 94 ntBASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AL137013.1-201ENST00000432946 1228 ntBASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 VENTXP5-201ENST00000523979 775 ntBASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 AL138966.2-201ENST00000621997 464 ntBASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.84■□□□□ 0.61
SHROOM3Q8TF72 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms