Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 IGHV3-72-202ENST00000621503 303 ntBASIC16.59■□□□□ 0.25
CHD6Q8TD26 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD6Q8TD26 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD6Q8TD26 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.58■□□□□ 0.25
CHD6Q8TD26 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 AC108073.2-201ENST00000464002 357 ntBASIC16.58■□□□□ 0.25
CHD6Q8TD26 AC017083.2-201ENST00000608069 979 ntBASIC16.58■□□□□ 0.25
CHD6Q8TD26 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHD6Q8TD26 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 HAUS4P1-201ENST00000406739 1145 ntBASIC16.58■□□□□ 0.24
CHD6Q8TD26 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 SERBP1P5-201ENST00000510079 1181 ntBASIC16.58■□□□□ 0.24
CHD6Q8TD26 AC006557.2-201ENST00000592985 1240 ntBASIC16.58■□□□□ 0.24
CHD6Q8TD26 AC005593.1-201ENST00000624894 515 ntBASIC16.58■□□□□ 0.24
CHD6Q8TD26 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD6Q8TD26 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHD6Q8TD26 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 KRT19P2-202ENST00000557173 1012 ntBASIC16.57■□□□□ 0.24
CHD6Q8TD26 RN7SL190P-201ENST00000582519 257 ntBASIC16.57■□□□□ 0.24
CHD6Q8TD26 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 SMG8-203ENST00000578922 2178 ntBASIC16.57■□□□□ 0.24
CHD6Q8TD26 AC004817.3-201ENST00000602957 2129 ntBASIC16.57■□□□□ 0.24
CHD6Q8TD26 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 MIR6787-201ENST00000616675 61 ntBASIC16.57■□□□□ 0.24
CHD6Q8TD26 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD6Q8TD26 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD6Q8TD26 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 BCYRN1-201ENST00000418539 200 ntBASIC16.56■□□□□ 0.24
CHD6Q8TD26 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms