Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RTL9Q8NET4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.76■■□□□ 1.23
RTL9Q8NET4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 AC104819.1-201ENST00000504587 486 ntBASIC22.76■■□□□ 1.23
RTL9Q8NET4 GUSBP12-201ENST00000513727 720 ntBASIC22.76■■□□□ 1.23
RTL9Q8NET4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL9Q8NET4 AP005901.3-202ENST00000581653 237 ntBASIC22.76■■□□□ 1.23
RTL9Q8NET4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.76■■□□□ 1.23
RTL9Q8NET4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.76■■□□□ 1.23
RTL9Q8NET4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 SLC25A24-204ENST00000569674 2357 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 AC009102.3-201ENST00000623118 1491 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 FOSL1P1-201ENST00000511041 816 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTL9Q8NET4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.75■■□□□ 1.23
RTL9Q8NET4 Z69720.1-201ENST00000601483 472 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 AL121772.3-201ENST00000610840 674 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.75■■□□□ 1.23
RTL9Q8NET4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 AC074051.2-201ENST00000565115 352 ntBASIC22.74■■□□□ 1.23
RTL9Q8NET4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 AC004263.2-201ENST00000617183 678 ntBASIC22.74■■□□□ 1.23
RTL9Q8NET4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTL9Q8NET4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.74■■□□□ 1.23
RTL9Q8NET4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 KRT18P31-201ENST00000506277 1292 ntBASIC22.73■■□□□ 1.23
RTL9Q8NET4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 AL160237.2-201ENST00000556165 472 ntBASIC22.73■■□□□ 1.23
RTL9Q8NET4 AC008687.5-201ENST00000593746 558 ntBASIC22.73■■□□□ 1.23
RTL9Q8NET4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTL9Q8NET4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.73■■□□□ 1.23
RTL9Q8NET4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.72■■□□□ 1.23
RTL9Q8NET4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms