Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 MIR4758-201ENST00000577688 71 ntBASIC17.98■□□□□ 0.47
HIPK4Q8NE63 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.98■□□□□ 0.47
HIPK4Q8NE63 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HIPK4Q8NE63 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 GUSBP6-202ENST00000438529 1198 ntBASIC17.97■□□□□ 0.47
HIPK4Q8NE63 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 AC097658.1-201ENST00000475555 843 ntBASIC17.97■□□□□ 0.47
HIPK4Q8NE63 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIPK4Q8NE63 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIPK4Q8NE63 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms