Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.52■□□□□ 0.71
SCN4BQ8IWT1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SCN4BQ8IWT1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCN4BQ8IWT1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCN4BQ8IWT1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 AC099343.3-201ENST00000605834 2503 ntBASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 MIR3180-4-201ENST00000582223 153 ntBASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN4BQ8IWT1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 AL162741.1-201ENST00000565563 1558 ntBASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN4BQ8IWT1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 PVRIG2P-201ENST00000435460 978 ntBASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 AC009065.1-201ENST00000564055 1225 ntBASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 AC011498.5-201ENST00000592027 486 ntBASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN4BQ8IWT1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms