Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 PP12613-201ENST00000424958 2230 ntBASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 MCRIP2P1-201ENST00000394346 511 ntBASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 AL136967.2-201ENST00000623968 743 ntBASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 AC083906.6-201ENST00000641366 219 ntBASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 AC018553.1-201ENST00000616682 1458 ntBASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CROCCP3Q8IVE0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 TERF1P2-201ENST00000583350 1212 ntBASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CROCCP3Q8IVE0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 AC105020.6-201ENST00000621523 1217 ntBASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CROCCP3Q8IVE0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 LINC00602-201ENST00000629776 2065 ntBASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 AC116351.2-201ENST00000606540 1585 ntBASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms