Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
USP48Q86UV5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.65■■□□□ 1.22
USP48Q86UV5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.65■■□□□ 1.22
USP48Q86UV5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.65■■□□□ 1.22
USP48Q86UV5 FOSL1P1-201ENST00000511041 816 ntBASIC22.65■■□□□ 1.22
USP48Q86UV5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
USP48Q86UV5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
USP48Q86UV5 AL121772.3-201ENST00000610840 674 ntBASIC22.65■■□□□ 1.22
USP48Q86UV5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.65■■□□□ 1.22
USP48Q86UV5 AC079602.3-201ENST00000623931 403 ntBASIC22.65■■□□□ 1.22
USP48Q86UV5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.65■■□□□ 1.22
USP48Q86UV5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.65■■□□□ 1.22
USP48Q86UV5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
USP48Q86UV5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USP48Q86UV5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.65■■□□□ 1.22
USP48Q86UV5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.65■■□□□ 1.22
USP48Q86UV5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP48Q86UV5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.64■■□□□ 1.22
USP48Q86UV5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.64■■□□□ 1.22
USP48Q86UV5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
USP48Q86UV5 AL138781.2-201ENST00000617896 1843 ntBASIC22.64■■□□□ 1.22
USP48Q86UV5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USP48Q86UV5 AC120498.9-201ENST00000339021 3867 ntBASIC22.64■■□□□ 1.21
USP48Q86UV5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.64■■□□□ 1.21
USP48Q86UV5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.64■■□□□ 1.21
USP48Q86UV5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
USP48Q86UV5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
USP48Q86UV5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.64■■□□□ 1.21
USP48Q86UV5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
USP48Q86UV5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
USP48Q86UV5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
USP48Q86UV5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.64■■□□□ 1.21
USP48Q86UV5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.64■■□□□ 1.21
USP48Q86UV5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
USP48Q86UV5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
USP48Q86UV5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
USP48Q86UV5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
USP48Q86UV5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
USP48Q86UV5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 LINC00265-3P-201ENST00000447588 903 ntBASIC22.63■■□□□ 1.21
USP48Q86UV5 SLC25A6P4-201ENST00000586535 553 ntBASIC22.63■■□□□ 1.21
USP48Q86UV5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
USP48Q86UV5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.63■■□□□ 1.21
USP48Q86UV5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
USP48Q86UV5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.63■■□□□ 1.21
USP48Q86UV5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 AC093525.10-201ENST00000625130 1569 ntBASIC22.63■■□□□ 1.21
USP48Q86UV5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USP48Q86UV5 CROCCP3-202ENST00000420820 1947 ntBASIC22.63■■□□□ 1.21
USP48Q86UV5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
USP48Q86UV5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
USP48Q86UV5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.62■■□□□ 1.21
USP48Q86UV5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
USP48Q86UV5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.62■■□□□ 1.21
USP48Q86UV5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
USP48Q86UV5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.62■■□□□ 1.21
USP48Q86UV5 TSPY22P-201ENST00000427496 604 ntBASIC22.62■■□□□ 1.21
USP48Q86UV5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
USP48Q86UV5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 AP002469.2-201ENST00000531724 424 ntBASIC22.62■■□□□ 1.21
USP48Q86UV5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 TPSP2-201ENST00000561760 610 ntBASIC22.62■■□□□ 1.21
USP48Q86UV5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms