Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX20Q7Z614 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX20Q7Z614 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 MIR3180-4-201ENST00000582223 153 ntBASIC18.38■□□□□ 0.53
SNX20Q7Z614 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.38■□□□□ 0.53
SNX20Q7Z614 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
SNX20Q7Z614 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX20Q7Z614 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX20Q7Z614 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 SEC1P-202ENST00000473944 940 ntBASIC18.37■□□□□ 0.53
SNX20Q7Z614 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AC024243.1-201ENST00000609234 778 ntBASIC18.37■□□□□ 0.53
SNX20Q7Z614 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SNX20Q7Z614 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX20Q7Z614 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX20Q7Z614 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX20Q7Z614 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX20Q7Z614 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX20Q7Z614 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNX20Q7Z614 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms