Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CSMD2Q7Z408 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CSMD2Q7Z408 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.57■□□□□ 0.08
CSMD2Q7Z408 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC005082.1-201ENST00000413042 2259 ntBASIC15.56■□□□□ 0.08
CSMD2Q7Z408 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC027612.4-201ENST00000605371 583 ntBASIC15.56■□□□□ 0.08
CSMD2Q7Z408 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC006333.2-201ENST00000607957 2099 ntBASIC15.56■□□□□ 0.08
CSMD2Q7Z408 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD2Q7Z408 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 AL096865.1-201ENST00000606796 927 ntBASIC15.55■□□□□ 0.08
CSMD2Q7Z408 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD2Q7Z408 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 RCC2P3-201ENST00000418112 1537 ntBASIC15.54■□□□□ 0.08
CSMD2Q7Z408 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 AC011467.4-201ENST00000594891 528 ntBASIC15.54■□□□□ 0.08
CSMD2Q7Z408 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD2Q7Z408 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD2Q7Z408 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms