Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19■□□□□ 0.63
DENND4AQ7Z401 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19■□□□□ 0.63
DENND4AQ7Z401 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19■□□□□ 0.63
DENND4AQ7Z401 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19■□□□□ 0.63
DENND4AQ7Z401 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19■□□□□ 0.63
DENND4AQ7Z401 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19■□□□□ 0.63
DENND4AQ7Z401 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DENND4AQ7Z401 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19■□□□□ 0.63
DENND4AQ7Z401 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DENND4AQ7Z401 NFYC-AS1-201ENST00000606277 1687 ntBASIC19■□□□□ 0.63
DENND4AQ7Z401 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
DENND4AQ7Z401 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19■□□□□ 0.63
DENND4AQ7Z401 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 AC112777.1-201ENST00000540175 1423 ntBASIC18.99■□□□□ 0.63
DENND4AQ7Z401 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DENND4AQ7Z401 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 AC141586.3-201ENST00000562166 1838 ntBASIC18.98■□□□□ 0.63
DENND4AQ7Z401 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 AC093909.1-201ENST00000504731 1122 ntBASIC18.98■□□□□ 0.63
DENND4AQ7Z401 SART3-203ENST00000546611 1184 ntBASIC18.98■□□□□ 0.63
DENND4AQ7Z401 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND4AQ7Z401 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 AC012640.2-201ENST00000561606 901 ntBASIC18.97■□□□□ 0.63
DENND4AQ7Z401 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND4AQ7Z401 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms