Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 IGHGP-201ENST00000390555 1178 ntBASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 GPR32P1-201ENST00000601788 811 ntBASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 MYLKP1-201ENST00000509077 1580 ntBASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
UBE3BQ7Z3V4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 KRT18P1-202ENST00000452408 1331 ntBASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.04■■□□□ 1.28
UBE3BQ7Z3V4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 MIR149-201ENST00000384879 89 ntBASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
UBE3BQ7Z3V4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 AC005082.1-201ENST00000413042 2259 ntBASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.02■■□□□ 1.28
UBE3BQ7Z3V4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 SDHAP2-201ENST00000455183 2001 ntBASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 AC112777.1-201ENST00000540175 1423 ntBASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 AC009102.3-201ENST00000623118 1491 ntBASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 TPSP2-201ENST00000561760 610 ntBASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.01■■□□□ 1.27
UBE3BQ7Z3V4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms