Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 AL357033.4-201ENST00000617703 1807 ntBASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC149Q6ZUS6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 AL032819.2-201ENST00000624543 2162 ntBASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 MRPL3P1-201ENST00000400109 1033 ntBASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 VENTXP7-201ENST00000475503 772 ntBASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 AC120114.3-201ENST00000611923 658 ntBASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 KRT8P50-201ENST00000562022 1438 ntBASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC149Q6ZUS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 KRT18P41-201ENST00000518924 1277 ntBASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 AL592071.1-201ENST00000611956 408 ntBASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC149Q6ZUS6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms