Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 AC004951.3-201ENST00000418645 1148 ntBASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 KSR1P1-201ENST00000446298 240 ntBASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 AC091390.4-202ENST00000476426 537 ntBASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 AC112777.1-201ENST00000540175 1423 ntBASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 HTR7P1-201ENST00000538670 1336 ntBASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCD3Q6STE5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 RPS2P4-201ENST00000476944 856 ntBASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCD3Q6STE5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 AL353807.1-201ENST00000427475 662 ntBASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 AC073648.6-201ENST00000641589 218 ntBASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCD3Q6STE5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.89■□□□□ 0.3
SMARCD3Q6STE5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMARCD3Q6STE5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMARCD3Q6STE5 AC020916.1-201ENST00000587762 1774 ntBASIC16.89■□□□□ 0.3
SMARCD3Q6STE5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMARCD3Q6STE5 KRT16P1-201ENST00000399124 1418 ntBASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 KRT8P45-201ENST00000414328 1447 ntBASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCD3Q6STE5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms