Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 AP000593.1-201ENST00000393668 712 ntBASIC21.96■■□□□ 1.11
CTR9Q6PD62 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 AL645929.1-201ENST00000420084 975 ntBASIC21.96■■□□□ 1.11
CTR9Q6PD62 PVRIG2P-201ENST00000435460 978 ntBASIC21.96■■□□□ 1.11
CTR9Q6PD62 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTR9Q6PD62 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CTR9Q6PD62 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTR9Q6PD62 MIR662-201ENST00000384847 95 ntBASIC21.95■■□□□ 1.1
CTR9Q6PD62 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTR9Q6PD62 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTR9Q6PD62 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTR9Q6PD62 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CTR9Q6PD62 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 AL162741.1-201ENST00000565563 1558 ntBASIC21.94■■□□□ 1.1
CTR9Q6PD62 AC093525.10-201ENST00000625130 1569 ntBASIC21.94■■□□□ 1.1
CTR9Q6PD62 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTR9Q6PD62 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CTR9Q6PD62 LETM1P2-201ENST00000597330 2178 ntBASIC21.94■■□□□ 1.1
CTR9Q6PD62 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CTR9Q6PD62 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.93■■□□□ 1.1
CTR9Q6PD62 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTR9Q6PD62 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.93■■□□□ 1.1
CTR9Q6PD62 AC026471.1-201ENST00000564629 3026 ntBASIC21.93■■□□□ 1.1
CTR9Q6PD62 AC099343.3-201ENST00000605834 2503 ntBASIC21.92■■□□□ 1.1
CTR9Q6PD62 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.92■■□□□ 1.1
CTR9Q6PD62 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms