Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 HLA-F-220ENST00000434407 884 ntBASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 Z98044.1-201ENST00000632503 1764 ntBASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEF17Q5VTA0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 AL162741.1-201ENST00000565563 1558 ntBASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF17Q5VTA0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 AC011498.5-201ENST00000592027 486 ntBASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 KRT8P7-201ENST00000533003 1432 ntBASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 AC087289.5-201ENST00000586076 3175 ntBASIC17.61■□□□□ 0.41
PRAMEF17Q5VTA0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF17Q5VTA0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms