Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC021087.4-201ENST00000563761 564 ntBASIC23.26■■□□□ 1.31
RC3H1Q5TC82 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RC3H1Q5TC82 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.25■■□□□ 1.31
RC3H1Q5TC82 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 AC027601.4-201ENST00000611259 610 ntBASIC23.24■■□□□ 1.31
RC3H1Q5TC82 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RC3H1Q5TC82 AC009102.3-201ENST00000623118 1491 ntBASIC23.24■■□□□ 1.31
RC3H1Q5TC82 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 ABCD1P5-201ENST00000445663 754 ntBASIC23.23■■□□□ 1.31
RC3H1Q5TC82 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 FAM197Y3-203ENST00000618346 717 ntBASIC23.23■■□□□ 1.31
RC3H1Q5TC82 AC009154.2-201ENST00000621177 724 ntBASIC23.23■■□□□ 1.31
RC3H1Q5TC82 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 AC125634.1-201ENST00000438758 1403 ntBASIC23.23■■□□□ 1.31
RC3H1Q5TC82 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.23■■□□□ 1.31
RC3H1Q5TC82 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 MTCL1P1-201ENST00000446207 792 ntBASIC23.22■■□□□ 1.31
RC3H1Q5TC82 SART3-203ENST00000546611 1184 ntBASIC23.22■■□□□ 1.31
RC3H1Q5TC82 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RC3H1Q5TC82 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms