Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KRT8P11-201ENST00000409686 1436 ntBASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 SIRPAP1-201ENST00000448467 1770 ntBASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 FLJ13224-201ENST00000313737 1514 ntBASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 Z85996.1-201ENST00000494644 937 ntBASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 AC083880.1-201ENST00000608266 535 ntBASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 IKBKGP1-201ENST00000612193 1073 ntBASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 MYLKP1-201ENST00000509077 1580 ntBASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00242Q5T6M2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 POM121L13P-201ENST00000422362 380 ntBASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 UNC93B4-201ENST00000505679 747 ntBASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 PRSS44-201ENST00000515154 1146 ntBASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms