Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SNAPC4Q5SXM2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SNAPC4Q5SXM2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNAPC4Q5SXM2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC30.14■■■□□ 2.41
SNAPC4Q5SXM2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 MTDHP5-201ENST00000598980 586 ntBASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC30.13■■■□□ 2.41
SNAPC4Q5SXM2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 AC125634.1-201ENST00000438758 1403 ntBASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 AC068472.1-201ENST00000474589 881 ntBASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 MTDHP4-201ENST00000600287 670 ntBASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 AC064836.3-201ENST00000607928 673 ntBASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC30.12■■■□□ 2.41
SNAPC4Q5SXM2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 INIP-202ENST00000374236 874 ntTSL 2 BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 FAM8A3P-201ENST00000427218 844 ntBASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNAPC4Q5SXM2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 LAGE3P1-201ENST00000425356 484 ntBASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNAPC4Q5SXM2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms