Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16■□□□□ 0.15
LRRK2Q5S007 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRRK2Q5S007 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16■□□□□ 0.15
LRRK2Q5S007 AL513190.1-201ENST00000621254 727 ntBASIC16■□□□□ 0.15
LRRK2Q5S007 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LRRK2Q5S007 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRRK2Q5S007 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 CD82-202ENST00000342935 967 ntTSL 5 BASIC16■□□□□ 0.15
LRRK2Q5S007 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16■□□□□ 0.15
LRRK2Q5S007 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16■□□□□ 0.15
LRRK2Q5S007 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16■□□□□ 0.15
LRRK2Q5S007 AC005498.2-205ENST00000593218 784 ntBASIC16■□□□□ 0.15
LRRK2Q5S007 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
LRRK2Q5S007 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRK2Q5S007 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 HEIH-201ENST00000623091 1652 ntBASIC15.99■□□□□ 0.15
LRRK2Q5S007 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 MIR4745-201ENST00000577608 62 ntBASIC15.99■□□□□ 0.15
LRRK2Q5S007 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.99■□□□□ 0.15
LRRK2Q5S007 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.99■□□□□ 0.15
LRRK2Q5S007 NKAPP1-205ENST00000585790 367 ntBASIC15.99■□□□□ 0.15
LRRK2Q5S007 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRK2Q5S007 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRK2Q5S007 SIGLEC30P-201ENST00000455569 941 ntBASIC15.98■□□□□ 0.15
LRRK2Q5S007 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 DUX4L17-201ENST00000557360 1267 ntBASIC15.98■□□□□ 0.15
LRRK2Q5S007 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 AL513210.1-201ENST00000629608 234 ntBASIC15.98■□□□□ 0.15
LRRK2Q5S007 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRK2Q5S007 LINC01521-201ENST00000504184 1943 ntBASIC15.97■□□□□ 0.15
LRRK2Q5S007 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 RCC2P3-201ENST00000418112 1537 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms