Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
RNFT1Q5M7Z0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.64■□□□□ 0.26
RNFT1Q5M7Z0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
RNFT1Q5M7Z0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 RNF165-205ENST00000588679 2904 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 TSPY19P-201ENST00000418461 509 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 TSPY18P-201ENST00000441642 509 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 FOSL1P1-201ENST00000511041 816 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 AC012615.1-201ENST00000565797 1299 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 AC111152.3-201ENST00000569699 673 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.64■□□□□ 0.25
RNFT1Q5M7Z0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 RN7SL606P-201ENST00000472779 293 ntBASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AC009065.1-201ENST00000564055 1225 ntBASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 IFNL4P1-201ENST00000607083 540 ntBASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AL353692.3-201ENST00000407031 1396 ntBASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 AC233702.3-201ENST00000578656 1387 ntBASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNFT1Q5M7Z0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AP000593.1-201ENST00000393668 712 ntBASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 AL592071.1-201ENST00000611956 408 ntBASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms